dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01189
Location and strand information: 137114 - 138412 (+)
Family: CBM51|GH27
Protein type: CAZyme
Protein description: Alpha-galactosidase A
Protein isoelectric point: 4.6225
Protein molecular weight: 50096.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01190
Location and strand information: 138593 - 139513 (+)
Family: HTH_5
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01191
Location and strand information: 139563 - 140150 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01192
Location and strand information: 140419 - 141240 (-)
Family: 1.B.52.2.1
Protein type: TC
Protein description: Methyl-accepting chemotaxis protein McpC

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01193
Location and strand information: 141552 - 142499 (-)
Family: GH43_26
Protein type: CAZyme
Protein description: Extracellular exo-alpha-(1->5)-L-arabinofuranosidase
Protein isoelectric point: 5.3596
Protein molecular weight: 35942.55
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01194
Location and strand information: 142515 - 143156 (-)
Family: 9.B.28.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01195
Location and strand information: 143170 - 144036 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01196
Location and strand information: 144050 - 144994 (-)
Family: 3.A.1.1.20
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01197
Location and strand information: 145052 - 146566 (-)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01198
Location and strand information: 146841 - 148430 (-)
Family: GH43_4|GH43
Protein type: CAZyme
Protein description: Extracellular endo-alpha-(1->5)-L-arabinanase 2
Protein isoelectric point: 4.7817
Protein molecular weight: 59001.99
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01199
Location and strand information: 148639 - 148962 (+)
Family: HTH_3
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01200
Location and strand information: 148971 - 149870 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Melibiose operon regulatory protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01201
Location and strand information: 150059 - 152065 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7911
Protein molecular weight: 77328.46
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01202
Location and strand information: 152128 - 152865 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01203
Location and strand information: 152852 - 153790 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01204
Location and strand information: 153913 - 154749 (+)
Family: 1.A.16.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01205
Location and strand information: 155057 - 156808 (+)
Family: null
Protein type: null
Protein description: Aspartate--tRNA ligase

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01206
Location and strand information: 156921 - 158303 (+)
Family: 2.A.38.1.1
Protein type: TC
Protein description: Trk system potassium uptake protein TrkA

Gene clsuter ID: MGYG000003486_34|CGC3
Gene ID: MGYG000003486_01207
Location and strand information: 158321 - 159760 (+)
Family: 2.A.38.1.1
Protein type: TC
Protein description: Trk system potassium uptake protein TrkG

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003486_01189	Alpha-galactosidase A	CAZyme	137114	138412	+	CBM51\| GH27
MGYG000003486_01190	hypothetical protein	TF	138593	139513	+	HTH_5
MGYG000003486_01191	hypothetical protein	null	139563	140150	-	DZR
MGYG000003486_01192	Methyl-accepting chemotaxis protein McpC	TC	140419	141240	-	1.B.52.2.1
MGYG000003486_01193	Extracellular exo-alpha-(1->5)-L-arabinofuranosidase	CAZyme	141552	142499	-	GH43_26
MGYG000003486_01194	hypothetical protein	TC	142515	143156	-	9.B.28.1.2
MGYG000003486_01195	L-arabinose transport system permease protein AraQ	TC	143170	144036	-	3.A.1.1.11
MGYG000003486_01196	Lactose transport system permease protein LacF	TC	144050	144994	-	3.A.1.1.20
MGYG000003486_01197	hypothetical protein	STP	145052	146566	-	SBP_bac_1
MGYG000003486_01198	Extracellular endo-alpha-(1->5)-L-arabinanase 2	CAZyme	146841	148430	-	GH43_4\| GH43
MGYG000003486_01199	hypothetical protein	TF	148639	148962	+	HTH_3
MGYG000003486_01200	Melibiose operon regulatory protein	TF	148971	149870	-	HTH_AraC
MGYG000003486_01201	hypothetical protein	CAZyme	150059	152065	+	GH31
MGYG000003486_01202	hypothetical protein	null	152128	152865	+	CxxCxxCC
MGYG000003486_01203	hypothetical protein	null	152852	153790	+	cobW
MGYG000003486_01204	hypothetical protein	TC	153913	154749	+	1.A.16.1.3
MGYG000003486_01205	Aspartate--tRNA ligase	null	155057	156808	+	tRNA_anti-codon\| tRNA-synt_2\| GAD
MGYG000003486_01206	Trk system potassium uptake protein TrkA	TC	156921	158303	+	2.A.38.1.1
MGYG000003486_01207	Trk system potassium uptake protein TrkG	TC	158321	159760	+	2.A.38.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature